From 1681c79452099fb51a8bb6d2f1d4c1ae17b83bbf Mon Sep 17 00:00:00 2001 From: Christoph Knote Date: Thu, 22 Sep 2022 11:47:59 +0200 Subject: [PATCH] Aye --- blueprints/operational_chemistry/iofields.met | 1 + .../machine_specific/alcc_spack/config.bash | 3 +++ jobs/pre/30_chem_wes_coldens.bash | 2 ++ machine_profiles/alcc_spack | 2 +- 4 files changed, 7 insertions(+), 1 deletion(-) diff --git a/blueprints/operational_chemistry/iofields.met b/blueprints/operational_chemistry/iofields.met index 54f5fbf..10455b4 100644 --- a/blueprints/operational_chemistry/iofields.met +++ b/blueprints/operational_chemistry/iofields.met @@ -1,3 +1,4 @@ +:h:0:alt +:h:0:gsw +:h:0:tke ++:h:0:SWDDIF \ No newline at end of file diff --git a/blueprints/operational_chemistry/machine_specific/alcc_spack/config.bash b/blueprints/operational_chemistry/machine_specific/alcc_spack/config.bash index c18860e..4d92780 100644 --- a/blueprints/operational_chemistry/machine_specific/alcc_spack/config.bash +++ b/blueprints/operational_chemistry/machine_specific/alcc_spack/config.bash @@ -92,6 +92,9 @@ exo_coldensBin=exo_coldens anthro_emisBin=anthro_emis fire_emisBin=fire_emis +# path to Wesely and Exo_Coldens input data +wesColdensDataPath=${WESELY_EXO_COLDENS_DATA} + # path to MEGAN input data MEGANdir=/alcc/gpfs2/home/mbees/data/emissions/biogenic/MEGAN diff --git a/jobs/pre/30_chem_wes_coldens.bash b/jobs/pre/30_chem_wes_coldens.bash index 86e525b..b10d6bf 100644 --- a/jobs/pre/30_chem_wes_coldens.bash +++ b/jobs/pre/30_chem_wes_coldens.bash @@ -2,6 +2,8 @@ # Wesely, Exo_coldens # ----------------------------------------------------------------------------- +ln -s ${wesColdensDataPath}/* . + ${weselyBin} < wesely.inp > wesely.out ${exo_coldensBin} < exo_coldens.inp > exo_coldens.out diff --git a/machine_profiles/alcc_spack b/machine_profiles/alcc_spack index 9134d72..39d138d 100644 --- a/machine_profiles/alcc_spack +++ b/machine_profiles/alcc_spack @@ -1,3 +1,3 @@ -module load wrf wps nco netcdf-c netcdf-fortran anthro_emis fire_emis megan_bio_emiss mozbc wesely-exo_coldens python gdal py-cartopy py-matplotlib py-netcdf4 py-numpy py-pyproj py-scipy py-requests py-simplekml py-pip +module load wrf wrf-chem wps nco netcdf-c netcdf-fortran anthro_emis fire_emis megan_bio_emiss mozbc wesely-exo_coldens python gdal py-requests py-cdsapi py-cartopy py-matplotlib py-netcdf4 py-numpy py-pyproj py-rasterio py-scipy py-shapely py-simplekml py-xarray py-pyshp py-pandas ulimit -s unlimited -- GitLab